Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015899015.1_cds_XP_016448951.1_43556
CDS Infomation

[gene=LOC107774021] [db_xref=GeneID:107774021] [protein=zingipain-2-like] [protein_id=XP_016448951.1] [location=join(3575..4016,5167..5747)] [gbkey=CDS]
Sequence

ATGGCTTTGATCCTTGGATGGAAAATACTATTTATCCTTCTTTTTGTGATAATTGGGATG
TGTACATCTCAAGTCACTTCTCGTAATATTCAAGCTTTATCCATGTTAGAAAAGCACGAG
TTATGGATGTCAAGTCATGGACGTACTTACAAAAATGAAGCAGAGAAGGAAAAGAGATTG
AATATATTTAAAGAGAATGTGAAATTTATTGAGTCTTTCAACAATAATGGGACTAAAAAG
CCATACAAATTAGGCATCAATGCATTTGCTGATCTTACTGCAGAGGAATTCTTGAGTTAT
TATACTACTGGACTTAAGTTGTCTAATTCCTACTCTCAAATTCAATCATCATTTAAGTAT
GAAAACTTGAGTGATGTTCCATCTGTTATGGACTGGAGAAAGAGTGGTGCTGTCACTAGA
ATCAAACATCAAGGTCAATGTGGATGTTGCTGGGCATTTTCAGCAGTTGCAGCCTTAGAA
GGAGCAAACAAACTCTCAACGAACAACTTGATTTCACTCTCCGAACAACAACTGTTAGAT
TGCACCACCGAAAATAACGGTTGCAACGGCGGTTTAATGACCACAGCCTACGATTTCATC
ATTCAAAATGGCGGCATTGCCACAGAATCCAACTACCCTTACGAGGAATATCAAGATTCA
TGCAAAAGCCAAGAGATGAACTCTGCAGTGAAAATCAATCGTTACGAAACTCTGCCCTCG
ACTGAATCAGCATTGTTAAAAGCCGTAGCTAAACAACCGGTCTCTATCGGTATTGCAGTG
AATGAAGATTTTCATCTGTACCAAAATGGTGTTTACAATGGAAATTGCGAGGGTCAAGAA
CTAAATCATGCAGTTACTGTAATTGGTTATGGGACAGAAAATGATGGTACAAAATATTGG
TTGATCAAGAATTCTTGGGGGACAAGTTGGGGTGAAAATGGTTACATGAAAATTGCTAGA
GATACTGGAATTGAAGGAGGTCTTTGTGGGATCACCACTTTAGCTTCCTATCCTGTTCTT
TAG

Peptide Sequence

PEP ID

XP_016448951.1
PEP Infomation

PREDICTED: zingipain-2-like [Nicotiana tabacum]
Sequence

MALILGWKILFILLFVIIGMCTSQVTSRNIQALSMLEKHELWMSSHGRTYKNEAEKEKRL
NIFKENVKFIESFNNNGTKKPYKLGINAFADLTAEEFLSYYTTGLKLSNSYSQIQSSFKY
ENLSDVPSVMDWRKSGAVTRIKHQGQCGCCWAFSAVAALEGANKLSTNNLISLSEQQLLD
CTTENNGCNGGLMTTAYDFIIQNGGIATESNYPYEEYQDSCKSQEMNSAVKINRYETLPS
TESALLKAVAKQPVSIGIAVNEDFHLYQNGVYNGNCEGQELNHAVTVIGYGTENDGTKYW
LIKNSWGTSWGENGYMKIARDTGIEGGLCGITTLASYPVL

Transcript Sequence

Gene sequence data has not been registered.